Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEAWFETVAIAQQRAKRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGVQA-VDPGGEVAVARAAAARGTVMGLSSFASKPIEEVIAA-NPKTFFQVYWQGGRDALAERVERARQAGAVGLVVTTDWT---FSHGRDWGSPKIPEEMNLKTILRLSPEAITRPRWLWKFAKTLRPPDLRVPNQGRRGEPGPPFFAAYGEWMATPPPTWEDIGWLRELWGGPFMLKGVMRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLSPADILVPTGFIRDLGVPSRRDV
1GOX Chain:A ((2-359))----EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGI----------------DLG-------------------LSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD-------------


General information:
TITO was launched using:
RESULT:

Template: 1GOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -197294 for 3036 contacts (-65.0/contact) +
2D Compatibility (PS) -37490 + (NN) -16857 + (LL) 2104
1D Compatibility (HY) -26400 + (ID) 6300
Total energy: -282237.0 ( -92.96 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_1GOX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GOX-query.scw
PDB file : Tito_Scwrl_1GOX.pdb: