Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ
3D3B Chain:J ((6-84))
MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRS---------------------RTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQI-
General information:
TITO was launched using:
RESULT:
Template:
3D3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50140 for 539 contacts (-93.0/contact) +
2D Compatibility (PS) -8458 + (NN) -3200 + (LL) 1560
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -70838.0 ( -131.42 by residue)
QMean score : 0.783
(partial model without unconserved sides chains):
PDB file :
Tito_3D3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D3B-query.scw
PDB file :
Tito_Scwrl_3D3B.pdb
: