Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTAAGLSGIDLTDLDNFA--DGFPHHLFAIHRREAPV-YWHRPTEHTPD---GEGFWSVATYAETLEVLRDPVTYSSVTGGQRRFGGTVLQDLPVAGQVLNMM---DDPRHTRIRRLVSSGLTPRMIRRVEDDLRRRARGLLDGV---EPGAPFDFVVEIAAELPMQMICILLGVPETDRHWLFEAVEPGFDFRGSRRATMPRLNVEDAGSRLYTYALELIAGKRAEPADDMLSVVANATIDDPDAPALSDAELYLFFHLLFSAGAETTRNSIAGGLLALAENPDQLQTLRSDFE-LLPTAIEEIVRWTSPSPSKRRTASRAVSLGGQPIEAGQKVVVWEGSANRDPSVFDRADEFDITRKPNPHLGF-GQGVHYCLGANLARLELRVLFEELLSRFGSVRVVEPAEWTRSNRHTGIRHLVVELRGG |
| 2WM4 Chain:A ((28-432)) | ------IADIELGSLDFWALDDDVRDGAFATLRREAPISFW--PTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNI------TINDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLATDFDEFMQ-VSADIGAYATALAEDRRVNHHDDLTSSLVEAEVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEPARLLSQFIHGIKTLPV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199264 for 3243 contacts (-61.4/contact) +
2D Compatibility (PS) -42428 + (NN) -26755 + (LL) 348
1D Compatibility (HY) -23600 + (ID) 7900
Total energy: -299599.0 ( -92.38 by residue)
QMean score : 0.483
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