Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRGEGEGRGPDGDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRTQSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG
2FWV Chain:A ((27-226))
--------------------------AAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRGEGEGRGPDGDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVA----------IELLLAHSAGYVELFYGRPRTQSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG
General information:
TITO was launched using:
RESULT:
Template:
2FWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53133 for 1375 contacts (-38.6/contact) +
2D Compatibility (PS) -19833 + (NN) -10599 + (LL) 300
1D Compatibility (HY) -24400 + (ID) 9500
Total energy: -117165.0 ( -85.21 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2FWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWV-query.scw
PDB file :
Tito_Scwrl_2FWV.pdb
: