Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAGGDHPR
2G4R Chain:A ((3-155))
--TRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAG-----
General information:
TITO was launched using:
RESULT:
Template:
2G4R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123984 for 1308 contacts (-94.8/contact) +
2D Compatibility (PS) -16430 + (NN) -4504 + (LL) -64
1D Compatibility (HY) -20000 + (ID) 7650
Total energy: -172632.0 ( -131.98 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_2G4R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G4R-query.scw
PDB file :
Tito_Scwrl_2G4R.pdb
: