Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
4YIF Chain:A ((4-143))
---SDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
General information:
TITO was launched using:
RESULT:
Template:
4YIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46036 for 882 contacts (-52.2/contact) +
2D Compatibility (PS) -16104 + (NN) -15217 + (LL) 308
1D Compatibility (HY) -16800 + (ID) 7000
Total energy: -100849.0 ( -114.34 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_4YIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YIF-query.scw
PDB file :
Tito_Scwrl_4YIF.pdb
: