Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
3DA8 Chain:A ((3-215))
--EPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
General information:
TITO was launched using:
RESULT:
Template:
3DA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169203 for 1715 contacts (-98.7/contact) +
2D Compatibility (PS) -24223 + (NN) -14980 + (LL) 328
1D Compatibility (HY) -27200 + (ID) 10600
Total energy: -245878.0 ( -143.37 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_3DA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DA8-query.scw
PDB file :
Tito_Scwrl_3DA8.pdb
: