Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNA--QSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
2OAR Chain:A ((24-148))
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIG--VNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTN--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OAR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39985 for 603 contacts (-66.3/contact) +
2D Compatibility (PS) -12477 + (NN) -2367 + (LL) -876
1D Compatibility (HY) -21600 + (ID) 6100
Total energy: -83405.0 ( -138.32 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_2OAR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OAR-query.scw
PDB file :
Tito_Scwrl_2OAR.pdb
: