Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
3TCK Chain:A ((2-189))
-AEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH--
General information:
TITO was launched using:
RESULT:
Template:
3TCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109054 for 1581 contacts (-69.0/contact) +
2D Compatibility (PS) -19831 + (NN) -5166 + (LL) 508
1D Compatibility (HY) -22400 + (ID) 9400
Total energy: -165343.0 ( -104.58 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3TCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TCK-query.scw
PDB file :
Tito_Scwrl_3TCK.pdb
: