Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
3Q0G Chain:F ((2-255))
-TYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT--
General information:
TITO was launched using:
RESULT:
Template:
3Q0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130419 for 2070 contacts (-63.0/contact) +
2D Compatibility (PS) -27538 + (NN) -8942 + (LL) 352
1D Compatibility (HY) -30400 + (ID) 12700
Total energy: -209647.0 ( -101.28 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0G-query.scw
PDB file :
Tito_Scwrl_3Q0G.pdb
: