Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQKPVADALTLELEPVVEANMTRHLDTEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFILEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADIEAYRDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQFVTG
1ZA0 Chain:A ((8-274))
-------DALTLELEPVVEANMTRHLDTEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDND---------------WWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVR----------VKYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADIEAYRDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQFVT-
General information:
TITO was launched using:
RESULT:
Template:
1ZA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156799 for 1843 contacts (-85.1/contact) +
2D Compatibility (PS) -25893 + (NN) -13178 + (LL) 2864
1D Compatibility (HY) -34400 + (ID) 11950
Total energy: -239356.0 ( -129.87 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1ZA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZA0-query.scw
PDB file :
Tito_Scwrl_1ZA0.pdb
: