Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSADNHQVPIEIRGLTKHF--GSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSV----RLLGGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDL-LARMRGGIDNAR-RAELIERFGLDP----TKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQR-GVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDPGDLSQIKGVEDISIEGTTVRAQVDSESLRELIQVLGHAGVRSLVSQPPTLEELFLRHYSLGPEVAAEQQVATP |
| 1OXU Chain:B ((2-247)) | -------VRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKI-LDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINEL---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93793 for 1845 contacts (-50.8/contact) +
2D Compatibility (PS) -25152 + (NN) -3529 + (LL) 5408
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -137166.0 ( -74.34 by residue)
QMean score : 0.411
|
|
|