Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDVDTDGLADT----EHRLKAISTPVKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGD-GHVINISSVFGLFSAPG-QAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNAT-------AAEGLDQAELAETFDKRVA---HLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
| 4YAI Chain:A ((3-249)) | ---IAGTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDEARQFFEERQQGRN--VHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAGIDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSMAEDN--IGVTVLMPGPIKSRIHESGQNRPERFRAGSGL--AETEQQLAKRVVADNWMEPTEVGDMIVDAIVHNKLYV------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75476 for 1999 contacts (-37.8/contact) +
2D Compatibility (PS) -25100 + (NN) -8959 + (LL) 2524
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -124161.0 ( -62.11 by residue)
QMean score : 0.518
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