Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR
3G5O Chain:C ((17-98))
-----PYTVRFTTTARRDLHKLPPRILAAVVEFAFGDLSREPLRVGKPLRRELAGTFSARRGTYRLLYRIDDEHTTVVILRVDHRAD----------
General information:
TITO was launched using:
RESULT:
Template:
3G5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62270 for 554 contacts (-112.4/contact) +
2D Compatibility (PS) -9330 + (NN) -7427 + (LL) 340
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -88887.0 ( -160.45 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_3G5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5O-query.scw
PDB file :
Tito_Scwrl_3G5O.pdb
: