Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKL-ADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD
3O0M Chain:A ((5-147))
MSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRNGDKLSF------RRDPDREESGRLLRAALAQLDSAE--
General information:
TITO was launched using:
RESULT:
Template:
3O0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80123 for 1009 contacts (-79.4/contact) +
2D Compatibility (PS) -15124 + (NN) -8658 + (LL) 672
1D Compatibility (HY) -15600 + (ID) 5150
Total energy: -123983.0 ( -122.88 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_3O0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O0M-query.scw
PDB file :
Tito_Scwrl_3O0M.pdb
: