Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRKVRRLTLAVSALVALFPAVAGCSDSGDNKPGATIPSTPANAEGRHGPFFPQCGGVSDQTVTELTRVTG----LVNTAKNSVGCQWLAGGGILGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIAIGNEPSLGDSLCEVGIQFSDDFIEWSVSFSQKPFPLPCDIAKELTRQSIANSK |
3V7B Chain:A ((22-65)) | ------------------------------------------------REGFEECPYLDSQWVADTNGQRMTGQGVDTRF-DTPACVFWSYPE------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -9320 for 175 contacts (-53.3/contact) +
2D Compatibility (PS) -4675 + (NN) -4199 + (LL) 7072
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -12572.0 ( -71.84 by residue)
QMean score : -0.021
|
|
|