Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHA-VCDAL-DEGHSAKAVIKAVAKATG-LSAKGAKTFAVDAASAYCPQYVTSS
3K9I Chain:A ((54-163))
AQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVL-ANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAILFYADKLDETWK---
General information:
TITO was launched using:
RESULT:
Template:
3K9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17245 for 690 contacts (-25.0/contact) +
2D Compatibility (PS) -11327 + (NN) -4769 + (LL) 336
1D Compatibility (HY) -400 + (ID) 650
Total energy: -34055.0 ( -49.36 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_3K9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K9I-query.scw
PDB file :
Tito_Scwrl_3K9I.pdb
: