Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWRYPLSTRLALPNTPGVASFAMTSSPSTVSTTLLSILRDDLNIDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEELLTCDTVGELEAAIAAKYRDE
2CGQ Chain:A ((5-73))
-----------------------------INATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWF---
General information:
TITO was launched using:
RESULT:
Template:
2CGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50682 for 445 contacts (-113.9/contact) +
2D Compatibility (PS) -7432 + (NN) -2377 + (LL) 1612
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -65929.0 ( -148.16 by residue)
QMean score : 0.764
(partial model without unconserved sides chains):
PDB file :
Tito_2CGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CGQ-query.scw
PDB file :
Tito_Scwrl_2CGQ.pdb
: