Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSEHPMTDRVVYRSLMADNLRWDALQLRDGDIIISAPSKSGLTWTQRLVSLL------------------VFDG-----PD--------LPGP----LSTVSPWLDQTIRPIEEVVATLDAQQHRRFIKTHTPLDGL--VLDDRVSYICVGRDPRDAAVSMLYQSANMNEDRMRILHEAVVPFHERIAPPFAELGHARSPTEEFRDWMEGPNQPPPGIGFTHLKGIGTLANILHQLGTVWVRRHLPNVALFHYADYQADLAGELLRPARVLGIAATRDRARDLAQYATLDAMRSRASEIAPNTTD----GIWHSDERFFRRGGSGDWQQFFTEAEHLRYYHRINQLAPPDLLAWAHEGRRGYDPAN |
| 1FML Chain:A ((44-325)) | ----------MVYRPYLKDAANIYNMPLRPTDVFVASYQRSGTTMTQELVWLIENDLNFEAAKTYMSLRYIYLDGFMIYDPEKQEEYNDILPNPENLDMERYLGLLEYSSRPGSSLLAAVPPTE-KRFVKTHLPLSLMPPNMLDTVKMVYLARDPRDVAVS---------------------SFHH------ARLLYLLNKQSNFKDFWE-----------MFHRGLYTLTPYFEHVKEAWAKRHDPNMLFLFYEDYLKDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKFKNNG---AVNMEDYREIGILADGEHFIRKGKAGCWRDYFDE--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85391 for 1743 contacts (-49.0/contact) +
2D Compatibility (PS) -26125 + (NN) -11281 + (LL) 4412
1D Compatibility (HY) -22000 + (ID) 4050
Total energy: -144435.0 ( -82.87 by residue)
QMean score : 0.302
|
|
|