Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAAGDAAIGRESRELMSAADVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLMIKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGHRELPLRADYVGKNVPTSRSESVHVRLREHDGRDGVVISR
5IAO Chain:A ((12-193))
-----------ESRELMSAADVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRD-----------STSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGHRELPLRADYVGKNVPTSRSESVHVRLREHDGRDGVVISR
General information:
TITO was launched using:
RESULT:
Template:
5IAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140808 for 1389 contacts (-101.4/contact) +
2D Compatibility (PS) -18543 + (NN) -8035 + (LL) 1072
1D Compatibility (HY) -22000 + (ID) 8550
Total energy: -196864.0 ( -141.73 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_5IAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5IAO-query.scw
PDB file :
Tito_Scwrl_5IAO.pdb
: