Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
1ZNY Chain:A ((19-201))
-------------------VGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVG------
General information:
TITO was launched using:
RESULT:
Template:
1ZNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106760 for 1310 contacts (-81.5/contact) +
2D Compatibility (PS) -20456 + (NN) -10401 + (LL) 0
1D Compatibility (HY) -24400 + (ID) 9150
Total energy: -171167.0 ( -130.66 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1ZNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZNY-query.scw
PDB file :
Tito_Scwrl_1ZNY.pdb
: