Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLPS
3ICO Chain:C ((22-268))
MSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLPS
General information:
TITO was launched using:
RESULT:
Template:
3ICO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140140 for 2159 contacts (-64.9/contact) +
2D Compatibility (PS) -27848 + (NN) -29993 + (LL) 0
1D Compatibility (HY) -29600 + (ID) 12350
Total energy: -239931.0 ( -111.13 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_3ICO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ICO-query.scw
PDB file :
Tito_Scwrl_3ICO.pdb
: