Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
1UZN Chain:A ((9-247))
--------AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
General information:
TITO was launched using:
RESULT:
Template:
1UZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129760 for 2047 contacts (-63.4/contact) +
2D Compatibility (PS) -26345 + (NN) -10512 + (LL) 584
1D Compatibility (HY) -29200 + (ID) 11800
Total energy: -207033.0 ( -101.14 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1UZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UZN-query.scw
PDB file :
Tito_Scwrl_1UZN.pdb
: