Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MYERRHERGMCDRAVEMTDVGATAAPTGPI---ARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATGATHGLLQETTR----------EVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIAHFVDRRTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 4V1S Chain:A ((37-395)) | PGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSFIWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVS---LPVQKNTICSAVTMLSCMK-LYEITQ--DRQYLDAAIRINDWTVENLLDKS-DNLLWDAKMVA-----------------------------DGSVNTQKWSYNAGFMIRSWLKMYQATKD-----------------EKYLSQAKATLASSEAKWYNSIN-------------GALNDPGYFAFSIIDSWFDMYDTDKN-------TVWLTKAFHAINFIHNKLRDG-----NGRYPEHWGTPTTSN----LEKYDLRFSTVAAYMY-------MRAANYKRILN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -348374 for 3013 contacts (-115.6/contact) +
2D Compatibility (PS) -35898 + (NN) -9144 + (LL) 7580
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -402386.0 ( -133.55 by residue)
QMean score : 0.269
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