Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGP-D---GVLRPTHCGATLIAGLD---MDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAG---ESLGFT-SGGVRLTRTKTRP-Y----LGDLGAAVAPRVDIVAVYPGSD-AVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
| 3NXK Chain:A ((8-333)) | -----------KSRIAILGTGGTIAGFIDSTIATTGYAAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLFAEGIDGVVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVVNKEAKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVIKAHTKNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKDVLKELL-KKGLKVVV--SSRVVAGCVAVSD----SDEKLGFISAEDLNPQKARVLLMLALTKTSDPKKIQEYFLK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229777 for 2649 contacts (-86.7/contact) +
2D Compatibility (PS) -34474 + (NN) -22339 + (LL) 324
1D Compatibility (HY) -20000 + (ID) 4700
Total energy: -310966.0 ( -117.39 by residue)
QMean score : 0.535
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