Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAGVTQLAGLARYPQPMAPAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARIAMVRAALPAGAASLDAGDFAAMSAAAFDRNWVAGLVG
4WOP Chain:D ((2-225))
-TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAGVTQLAGLARYPQPMAPAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARIAMVRAALPAGAASLDAGDFAAMSAAAFDRNWVAGLV-
General information:
TITO was launched using:
RESULT:
Template:
4WOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205074 for 1971 contacts (-104.0/contact) +
2D Compatibility (PS) -24754 + (NN) -15534 + (LL) 36
1D Compatibility (HY) -28400 + (ID) 11200
Total energy: -284926.0 ( -144.56 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_4WOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WOP-query.scw
PDB file :
Tito_Scwrl_4WOP.pdb
: