Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEI--WRGVTSEGAEARWYSEAQEVSDDSPALAQPAVPNYRGSCWIPFSIELEGDAASFVGEIGKILADSVEQLQAAAFVNGSGNG-EPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQASAAFAANLSTINTLRQAETSNGALKFPSLHDS-PPMLAGKSVLEVSHMDTVDSAVTATNHPLVLGDWK-QFLIGDRVGSMVELVPHLFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
| 3QPR Chain:A ((119-383)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQIPGIIM-PGLRRLT-IRDLLAQGRTSSNALEYVREEVFTNNA---------PESDITFSKQTANVKTIAHWVQASRQVMDDAPMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVATAYD---TSLNATGDTRADIIAHAIYQVTESEFSASGIVLNPRDWHNIALLKDNEGRYIFGGPQAFTSNIMWGLPVVPTKAQAA-------G--TFTVGGFDMASQVWDRMDATVEVSREDR--DNFVKNMLTILCEERLALAHYRPTAIIKGTFSS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96030 for 1886 contacts (-50.9/contact) +
2D Compatibility (PS) -26829 + (NN) -11186 + (LL) 13824
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -123021.0 ( -65.23 by residue)
QMean score : 0.274
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