Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLPDDRLEELLALAHEVRMRWC-GPEVEVEGIISLKTGGCPEDCHFCSQSGLFASPVRSAWLD-IPSLVEAAKQTAKSGATEFCIVAA-VRGPDERLMAQVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSFFANVVTTHTWEERWQTLSMVRDAGMEVCCGGILGMGETLQQRAEFAAELAELG--PDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLRFAGGREITLGDLGAKRGILGGINAVIVGNYLT-TLGRPAEADLELLDELQMPLKALNASL |
| 1R30 Chain:A ((27-338)) | ---------------------------------RPRWTLSQVTELFE---KPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHE-RDMPYLEQMVQGVKA-MGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAM-CFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184043 for 2666 contacts (-69.0/contact) +
2D Compatibility (PS) -34206 + (NN) -22057 + (LL) 2300
1D Compatibility (HY) -22400 + (ID) 5050
Total energy: -265456.0 ( -99.57 by residue)
QMean score : 0.607
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