Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
4LOM Chain:A ((16-206))
---------SRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRV----------
General information:
TITO was launched using:
RESULT:
Template:
4LOM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136292 for 1660 contacts (-82.1/contact) +
2D Compatibility (PS) -20469 + (NN) -8092 + (LL) 976
1D Compatibility (HY) -22400 + (ID) 9550
Total energy: -195827.0 ( -117.97 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_4LOM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LOM-query.scw
PDB file :
Tito_Scwrl_4LOM.pdb
: