Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYADRDLPGAGGLAVRVIPCLDVDDGRVVKGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSSGRATMLEVVRRTAEQVFIPLTVGGGVRTVADVDSLLRAGADKVAVNTAAIACPDLLADMARQFGSQCIVLSVDARTVPVGSAPTPSGWEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMDADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPAVA-AGADAVLAASVFHFRELTIGQVKAALAAEGITVR
4EVZ Chain:A ((3-249))
-------------AKRIIPCLDVKDGRVVKG----NLRDAGDPVELAARYDEEGADELVFLDITASHEGRETMLEVVERTAEQVFIPLTVGGGIRSVEDASRLLRAGADKVSINTAAVKNPELITEAAEEFGSQAVVVAIDAKRVG-------GGWEVFTHGGRKPTGLDAVEWARKVVELGAGEILLTSMDRDGTKAGYDLELTRAVSEAVSVPVIASGGAGELEHFAEVFELEGADAALAASIFHFGEITIREVKAYLRERGIEV-
General information:
TITO was launched using:
RESULT:
Template:
4EVZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179102 for 2148 contacts (-83.4/contact) +
2D Compatibility (PS) -26943 + (NN) -14907 + (LL) 588
1D Compatibility (HY) -24400 + (ID) 8350
Total energy: -253114.0 ( -117.84 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4EVZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EVZ-query.scw
PDB file :
Tito_Scwrl_4EVZ.pdb
: