Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------MPDEPTPPEATTPNSESDPRYDSAGVPTF-ESVREKIETRYGTAL-GATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTDE-
1J26 Chain:A ((1-112))
GSSGSSGEHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSR---YQFRNLAECLQKIRDMIAEASGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1J26.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 20786 for 487 contacts (42.7/contact) +
2D Compatibility (PS) -8946 + (NN) -8411 + (LL) 380
1D Compatibility (HY) -1200 + (ID) 900
Total energy: 1709.0 ( 3.51 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1J26.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J26-query.scw
PDB file :
Tito_Scwrl_1J26.pdb
: