Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPKLFKPSIDWSRAFPDSVYWVGKAWTISAICVLAILVLLRYLTPWGRQFWRITRAYFVGPNSVRVWLMLGVLLLSVVLAVRLNVLFSYQGNDMYTALQKAFEGIASGDGTVKRSGVRGFWMSIGVFSVMAVLHVTRVMADIYLTQRFIIAWRVWLTHHLTQDWLDGRAYYRDLFIDETIDNPDQRIQQDVDIFTAGAGGTPNAPSNGTA--STLLFGAVQSIISVISFTAILWNLSGTLNI-FGVSIPRAMFWTVLVYVFVATVISFIIGRPLIWLSFRNEKLNAAFRYALVRLRDAA--EAVGFYRGERVEGTQLQRRFTPVIDNYRR---YVRRSIAF--NGWNLSVSQTIVPLPWVIQAPRLFAGQIDFGDVGQTATSFGNIHDSLSFFRNNYDAFASFRAAIIRLHGL--VDANE---KGRALPAVLTR--PSDDESVELNDIEVRTPAGDRLIDPLDVRLDRGGSLVITGRSGAGKTTLLRSLAELWPYASGTLHRPGGENETMFLSQL----PYVPLGT-LRDVVCYPNSAAAIPDATLRDTLT---KVALAPLCDRLDEERDW-----AKVLSPGEQQRVAFARILLTKPKAVFLDESTSALDTGLEFALYQLLRSELPDCIVISV--SHRPALERLHENQLELLGGGQWRLAPVEAAPAEV |
| 4MYC Chain:A ((212-632)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGLTRAMDRGTKGISQVLTAMVFHIIP-ISFEISV--VCGILTYQFGASFAAITFSTMLLYSI------FTIKTTAWRTHFRRDANKADNKAASVALDSLINFEAVKYFNNEKY----LADKYNGSLMNYRDSQIKVSQSLAFLNSGQNLIFTTALTAMMY-MGCTGVIGGNLTVGDLVLINQLVFQLSVPLNFLGSVY---RDLKQSLIDMETLFKLRKNEVKIKNAERPLMLPENVPYD---ITFENVTFGYHPDRKILKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVIGVVPQDTPLFNDTIWENVKFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEKQRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFTSGSRTSVYIAHR------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147698 for 2590 contacts (-57.0/contact) +
2D Compatibility (PS) -40242 + (NN) -6150 + (LL) 20448
1D Compatibility (HY) -26800 + (ID) 5800
Total energy: -206242.0 ( -79.63 by residue)
QMean score : 0.325
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