Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKLQLR-----AVVADRRLDVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRLGDRVLTDTEAGVNVATHDRRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRASALRWLREVNAEQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARSGCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGV---NLVNGTIGPDGS--L--RTQ---SGAHWYGTPVQDLPTGHEAIAVFPPTAVAVYPEPPHGSPRNIVGLTVAEVDTRGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEVALHPAPHQHASS
3RLF Chain:A ((2-361))-ASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMND------TPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG----AKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIA-----DVILEGEVQVVEQLGNETQIHIQIP---SIR--QNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTA---


General information:
TITO was launched using:
RESULT:

Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199104 for 2641 contacts (-75.4/contact) +
2D Compatibility (PS) -37765 + (NN) -19203 + (LL) -68
1D Compatibility (HY) -21600 + (ID) 4750
Total energy: -282490.0 ( -106.96 by residue)
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_3RLF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RLF-query.scw
PDB file : Tito_Scwrl_3RLF.pdb: