Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDA--LIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSAL---IHRLAQRKTDISNAVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK |
| 4G9H Chain:A ((47-191)) | ---------------------------------------------------------------------LSINPKGQVPALVLDDGSL-LTEGVAIVQYLADKVPDRHL-----------IAPSGTLSRYHAIEWLNFIATELHKGFSPLFNPNTPDEYKTIVRERLD-------------KQFSYVDSVLAEHDYLLGKKFSVADAYLFTVSRWANALNLQIKERSHLDQYMARVAER------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43672 for 917 contacts (-47.6/contact) +
2D Compatibility (PS) -14838 + (NN) -5988 + (LL) 13684
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -61614.0 ( -67.19 by residue)
QMean score : 0.203
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