Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
4CHG Chain:J ((41-76))
----------------------------------------LVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKL----
General information:
TITO was launched using:
RESULT:
Template:
4CHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -628 for 127 contacts (-4.9/contact) +
2D Compatibility (PS) -4046 + (NN) -1957 + (LL) 3720
1D Compatibility (HY) -4000 + (ID) 1800
Total energy: -8711.0 ( -68.59 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4CHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CHG-query.scw
PDB file :
Tito_Scwrl_4CHG.pdb
: