Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFTSLPRSGTVRAARLLAEIGDCRARFP--TPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLRDAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILARAWLYAIWHCWQDGAAYHPANHRALQALLNQDQDRAA |
2BGW Chain:A ((161-203)) | -------------------------------------------------------LYILQSFPGIGRRTAERILERFGS-LERFFTASKAEISKVEGIG--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14254 for 220 contacts (-64.8/contact) +
2D Compatibility (PS) -4449 + (NN) -1653 + (LL) 11388
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -12718.0 ( -57.81 by residue)
QMean score : 0.776
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