Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAPPSPTASCDVISPVAIPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHRTARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQLDIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTV------------EPLLATVLPQIANWLNAPGHTEEV-ILLYLEDQLKNASAYESVVATLDQVLRRADGTSLIYRPNPARRATNG----CVPLPLDVSREEIRASGARAVLVGSCAPGWSAAVFDWSGVELESGSNSGYRPYPACDATYGRGVYAWRLVRYYEDSTLATALANPTRPPANPQALTPPKVPAMTDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRAGAGACALQGADGRWVAASCGDPHPAACRDAAGRWTVTPAPVVFAGAALACTAIGADFTLPRTGNQNARLHAVAGPAGGAWVHYLLPP |
| 3H4X Chain:A ((25-194)) | --------------------------------------------------------------------------------------------------------------ATTYGTSTSVGVHNAYEKEK------------YRYFADALDSGAALLELDLWSNAL-----GRSWRVSHSNPLGN-NSNCEGAANASELRTKSRDQDFAGCLSDMRAWHDA--HPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQK-LGDAVYGPGDLTGGHATADEAVRAGGWPSRADL---AGKFLFELI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67369 for 1105 contacts (-61.0/contact) +
2D Compatibility (PS) -16666 + (NN) -11388 + (LL) 18512
1D Compatibility (HY) -1600 + (ID) 1550
Total energy: -80061.0 ( -72.45 by residue)
QMean score : 0.319
|
|
|