Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGDGANGGPGQPGGPGGLLYGNGGHGGAGAAGQDRGAGNSAGLIGNGGAGGAGGNGGIGGAGAPGGLGGDGGKGGFADEFTGGFAQGGRGGFGGNGNTGASGGMGGAGGAGGAGGAGGLLIGDGGAGGAGGIGGAGGVGGGGGAGGTGGGGVASAFGGGNAFGGRGGDGGDGGDGGTGGAGGARGAGGAGGAGGWLSGHSGAHGAMGSGGEGGAGGGGGARGEAGAGGGTSTGTNPGKAGAPGTQGDSGDPGPPG |
| 2PNE Chain:A ((1-81)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CKGADGAHGVNGCPGTAGAAGSVG-GPGCDGGHGGNGGNGNPGCAGGVGGAG--GASGGTGVGGRGGKGGSGTPKGADGAPGAP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36226 for 732 contacts (49.5/contact) +
2D Compatibility (PS) -7612 + (NN) -6768 + (LL) -9088
1D Compatibility (HY) 800 + (ID) 1700
Total energy: 11858.0 ( 16.20 by residue)
QMean score : 0.318
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