Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGDRDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEIDQARHQHSSQRDMLTATLDPELAGLYERQRAG-GGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLRLEGFEE |
| 3NA7 Chain:A ((3-237)) | ---SNTHLKQLIEISHLDKEIDSLEPLIREKRK--DLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIK-SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLT--SGDMITCPYCGRILYAEGA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29177 for 1485 contacts (-19.6/contact) +
2D Compatibility (PS) -27560 + (NN) -23725 + (LL) 1340
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -90172.0 ( -60.72 by residue)
QMean score : 0.700
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