Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDAL-AATSKDAIDKVNAYVAAFNQGR----NTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF |
3MLR Chain:H ((57-157)) | --------------------------------------------------------------------------------------------------------------------DAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFD-------LWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGG-TAALGCLVKDYF--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MLR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5261 for 402 contacts (13.1/contact) +
2D Compatibility (PS) -9555 + (NN) 2949 + (LL) 11228
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: 3183.0 ( 7.92 by residue)
QMean score : 0.125
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