Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYLDVDGI-GQVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASKVFPVA--------PFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENR-P-GGVRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGV-VAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARAFRPVSTGRFLTDMVREKVSRR |
| 1PYF Chain:A ((2-310)) | -KKAKLGKSDLQVFPIGLGTNAVGGHNL-YP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKD--GLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFA---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156976 for 2451 contacts (-64.0/contact) +
2D Compatibility (PS) -31932 + (NN) -13340 + (LL) 1660
1D Compatibility (HY) -15600 + (ID) 4550
Total energy: -220738.0 ( -90.06 by residue)
QMean score : 0.551
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