Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCCAVCGPEPGRIGEVTPLGPCPAQHRGGPLRPSELAQASVMAALCAVTAIISVVVPFAAGLALLGTVPTGLLAYRYRLRVLAAATVAAGMIAFLIAGLGGFMGVVHSAYIGGLTGIVKRRGRGTPTVVVSSLIGGFVFGAAMVGMLAAMVRLRHLIFKVMTANVDGIAATLARMHMQGAAADVKRYFAEGLQYWPWVLLGYFNIGIMIVSLIGWWALSRLLERMRGIPDVHKLDPPPG-DDVDALIGPVPVRLDKVRFRYPRA-GQDALREVSLDVRAGEHLAIIGANGSGKTTLMLILAGR-APTSGTVDRPGTVGL-----GKLGGTAVVLQHPESQVLGTRVADDVVWGLPLGTTADVGRLLSEVGLEA-----------LAERDTGSLSGGELQRLALAAALAREPAMLIADEVTTMVDQQGRDALLAVLSGLTQRHRTALVHITHYDNEADSADRTLSLSDSPDN--------TDM------------V---------------H----------T----------------------------------------------------------A------------------------------------------------------AM-PA-PV----------------------------------------------------------------I-------------------------------------------------------------------------------------------G-V-------------------------------------------------D-------QPQHAPALELVGVGHEYASGTPWAKTALRDINFVVEQGDGVLIHGGNGSGKSTLAWIMAGLTIPTTGACLLDGRPTHE-----QVGAVALSFQAARLQLMRSRVDLEVASAAGFSASEQDRVAAALTVVGLDPA----------LGARRIDQLSGGQMRRVVLAGLLARAPRALILDEPLAGLDAASQRGLLRLLEDLRRARGLTVVVVSHDFAGMEELCPRTLHLRDGVLESAAASEAGGMS
4F4C Chain:A ((385-1301))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPA--LFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAA--KGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPER--PEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTL--FDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAR-E-GRTCIVIAHRLNTVM-NADCIAVVSNGTIIEKGTHTQ----


General information:
TITO was launched using:
RESULT:

Template: 4F4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -217686 for 3421 contacts (-63.6/contact) +
2D Compatibility (PS) -50143 + (NN) -29864 + (LL) 18020
1D Compatibility (HY) -14400 + (ID) 5050
Total energy: -299123.0 ( -87.44 by residue)
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_4F4C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F4C-query.scw
PDB file : Tito_Scwrl_4F4C.pdb: