Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLRRWSVPPVRPPVTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR
4L69 Chain:A ((2-248))
-VAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQ---GGLRARVLRRWSVPPVRPPVTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWD--------------
General information:
TITO was launched using:
RESULT:
Template:
4L69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185477 for 1956 contacts (-94.8/contact) +
2D Compatibility (PS) -26191 + (NN) -5231 + (LL) 1112
1D Compatibility (HY) -32000 + (ID) 12200
Total energy: -259987.0 ( -132.92 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_4L69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L69-query.scw
PDB file :
Tito_Scwrl_4L69.pdb
: