Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMVKSIAAGLTAAAAIGAAAAGVTSIMAGGPVVYQMQPVVFGAPLPLDPASAPDVPTAAQLTSLLNSLADPNVSFANKGSLVEGGIGGTEARIADHKLKKAAEHGDLPLSF---SVTNIQPAAAGSATADVSVSGPK--LSSPVTQNVTFVNQ-GGWMLSRASAMELLQAAGN
2RSX Chain:A ((58-154))
------------------------------------------------------DLGTKAKAVNYLTPIFTKTAIEK--------GFKDYHFTVSKGKLAVPIGDGDNLLNWKKSTAKLISKKG-S--TITYEFTVPTLDGSPSAKRKVTFVKENKKWKVNQ------------
General information:
TITO was launched using:
RESULT:
Template:
2RSX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15800 for 496 contacts (-31.9/contact) +
2D Compatibility (PS) -9585 + (NN) -638 + (LL) 5228
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -25345.0 ( -51.10 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_2RSX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RSX-query.scw
PDB file :
Tito_Scwrl_2RSX.pdb
: