Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
2KHR Chain:A ((4-74))
MSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
General information:
TITO was launched using:
RESULT:
Template:
2KHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25663 for 357 contacts (-71.9/contact) +
2D Compatibility (PS) -7355 + (NN) -3160 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3550
Total energy: -49328.0 ( -138.17 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2KHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KHR-query.scw
PDB file :
Tito_Scwrl_2KHR.pdb
: