Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVWLRAGALVAAVMLSLSGCGGFHAGAPSTAGPCEIVPNGTPAPKTPPATVPSSRNLATNPEIATGYRRDMTVVRTAHYAAATANPLATQVACRVLRDGGTAADAVVAAQAVLGLVEPQSSGIGGGGYLVYFDARTGSVQAYDGREVAPAAATENYLRWVSDVDRSAPRPNARASGRSIGVPGILRMLEMVHNEHGRTPWRDLFGPAVTLADGGFDISARMGAAISDAAPQLRDDPEARKYFLNPDGSPKPAGTRLTNPAYSKTLSAIASAGANAFYSGDIAHDIVAAASDTSNGRTPGLLTIEDLAGYLAKRRQPLCTTYRGREICGM--PSSGGVAVAATLGILEHFPMSDYAPSKVDLNGGRPTVMGVHLIAEAERLAYADRDQYIADVDFVRLPGGSLTTLVDPGYLAARAALISPQHSMGS-----A-RPGDF-GAPT-A-VAPPVPEHGTSHLSVVDSYGNAATLTTTVESSFGSYHLV--DGFILNNQLSDFSAEPHATDGSPVANRVEPGKRPRSSMAPTLVFDHSSAGRGALYAVLGSPGGSMIIQFVVKTLVAMLDWGLNPQQAVSLVDFGAANSPHTNLGGE-NPEINTSDDGDHDPLVQGLRALGHRVNL-AEQSSGLSAITRS-EA-GWAGGADPRREGAVMGDDA |
| 4Y23 Chain:A ((36-579)) | ------------------------------------------------------------------------KVAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMF--LDEDGKVIPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSK-TAAKDIFL-PDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQD-----FGGSMTPDDLSRYEVTTDKPIWGEYHGYDIASMPPPSSGGVFMLQMLKLIDDFHLSQYD---------PKSFEKYHLLAETMHLSYADRAAYAGDPEFVDVP---LRGLLDPDYIKERQKLISLDSMNRDVKEGDPWKYEEGEPNYEIVPQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDAIPG------GANEVQPNKRPLSSMTPTIVFK-----DEKPVLTVGSPGGTTIIASVFQTILNYFEYGMSLQDAIEEPRIY------TNSLTSYRYES-----GMPEDVRRKLNDFGHKFGSNPVDIGNVQSIFIDRENKTFMGVADSSRNGTAVGVN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212148 for 5058 contacts (-41.9/contact) +
2D Compatibility (PS) -56850 + (NN) -30992 + (LL) 1980
1D Compatibility (HY) -30800 + (ID) 9050
Total energy: -337860.0 ( -66.80 by residue)
QMean score : 0.470
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