Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVPEPGWSAVIPAFNA---SEQGRGVQVITSYGASADQSRGVADGKPADLVNFSVEPDIARLVKAGKVDKDWDADA-TKGIPFGSVVTFVVRAGNPKNIRDWDDLLRPGIEVITPSPLSSGSAKWNLLAPYAAKSDGGRNNQAGI-DFVNTLVNEHVKLRPGSGREATDVFVQ-GSGDVLISYENEA-IATERAGK-PVQHVTPPQTFKIENPLA----VVATSTHLGAATAFRNFQYTVQAQKLWAQAGFRPVDPAVAADFADLFPVPAKLWTIAD-LGGWGSVDPQLFDKATGSITKIYLRATG |
| 1SBP Chain:A ((8-298)) | ------------------------------------------------------------VSYDPTRELYEQYNKAFSAHWKQETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERGRIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALF-KNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFP-KLKLFTIDEVFGGWAKAQKDHF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80339 for 2391 contacts (-33.6/contact) +
2D Compatibility (PS) -30047 + (NN) -8096 + (LL) 4408
1D Compatibility (HY) -18000 + (ID) 5200
Total energy: -137274.0 ( -57.41 by residue)
QMean score : 0.379
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