Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVVGIVSERDVVRQLHTYGASVLSRPVAKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG
2RC3 Chain:C ((8-131))
--VKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAIS----------------
General information:
TITO was launched using:
RESULT:
Template:
2RC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109394 for 898 contacts (-121.8/contact) +
2D Compatibility (PS) -13368 + (NN) -5865 + (LL) 1864
1D Compatibility (HY) -14000 + (ID) 2500
Total energy: -143263.0 ( -159.54 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_2RC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RC3-query.scw
PDB file :
Tito_Scwrl_2RC3.pdb
: