Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL
4PZA Chain:B ((2-218))
-RARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQV-----
General information:
TITO was launched using:
RESULT:
Template:
4PZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70218 for 1805 contacts (-38.9/contact) +
2D Compatibility (PS) -24089 + (NN) -17055 + (LL) 444
1D Compatibility (HY) -25600 + (ID) 10850
Total energy: -147368.0 ( -81.64 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_4PZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PZA-query.scw
PDB file :
Tito_Scwrl_4PZA.pdb
: