Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT
4KXR Chain:B ((1-174))
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA--------------------
General information:
TITO was launched using:
RESULT:
Template:
4KXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42533 for 1067 contacts (-39.9/contact) +
2D Compatibility (PS) -18919 + (NN) -7547 + (LL) 896
1D Compatibility (HY) -24800 + (ID) 8700
Total energy: -101603.0 ( -95.22 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_4KXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KXR-query.scw
PDB file :
Tito_Scwrl_4KXR.pdb
: